set_base_url

Function to change the g:Profiler base URL. Useful for overriding the default URL (http://biit.cs.ut.ee/gprofiler)
with the beta (http://biit.cs.ut.ee/gprofiler_beta) or an archived version (available starting from the version e94_eg41_p11, e.g. http://biit.cs.ut.ee/gprofiler_archive3/e94_eg41_p11).

A toolset for functional enrichment analysis and visualization, gene/protein/SNP identifier conversion and mapping orthologous genes across species via 'g:Profiler' (<https://biit.cs.ut.ee/gprofiler/>).
The main tools are:
(1) 'g:GOSt' - functional enrichment analysis and visualization of gene lists;
(2) 'g:Convert' - gene/protein/transcript identifier conversion across various namespaces;
(3) 'g:Orth' - orthology search across species;
(4) 'g:SNPense' - mapping SNP rs identifiers to chromosome positions, genes and variant effects.
This package is an R interface corresponding to the 2019 update of 'g:Profiler' and provides access to 'g:Profiler' for versions 'e94_eg41_p11' and higher. See the package 'gProfileR' for accessing older versions from the 'g:Profiler' toolset.

Liis Kolberg

gprofiler2

Interface to the 'g:Profiler' Toolset

set_base_url function

Arguments

Set the base URL. — set_base_url

set_base_url: Set the base URL.

Description

Usage

Arguments