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gputools (version 0.2)

A few GPU enabled functions

Description

This package provides R interfaces to a handful of common statistical algorithms. These algorithms are implemented in parallel using a mixture of Nvidia's CUDA langauge, Nvidia's CUBLAS library, and EMI Photonics' CULA libraries. On a computer equiped with an Nvidia GPU some of these functions may be substantially more efficient than native R routines.

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Version

Install

install.packages('gputools')

Monthly Downloads

26

Version

0.2

License

GPL-3

Maintainer

Josh Buckner

Last Published

April 5th, 2010

Functions in gputools (0.2)

gpuSolve

Estimate the solution to a matrix vector equation
chooseGpu

Choose which GPU device to use
gpuHclust

Perform Hierarchical Clustering for Vectors with a GPU
gpuTtest

T-Test Estimator with a GPU
gpuLsfit

Least squares fit using GPU--enabled QR decomposition
gpuMatMult

Perform Matrix Multiplication with a GPU
gpuDist

Compute Distances Between Vectors on a GPU
getGpuId

Discover the Id of the current GPU device
gpuFastICA

GPU enabled FastICA algorithm
gpuSvmTrain

Train a support vector machine on a data set
cpuMatMult

Perform Matrix Multiplication
gpuCrossprod

Perform Matrix Cross-product with a GPU
gpuGlm

Fitting generalized linear models using GPU--enabled QR decomposition
gpuTcrossprod

Perform Matrix Transposed Cross-product with a GPU
gpuDistClust

Compute Distances and Hierarchical Clustering for Vectors on a GPU
gpuMi

B spline based mutual information
gpuCor

Calculate Various Correlation Coefficients With a GPU
gpuSvd

Singular Value Decomposition of a Matrix with a GPU
gpuLm.fit

Fitter functions for gpu enabled linear models
getAucEstimate

Estimate the AUC of the ROC
gpuLm

Fitting Linear Models using a GPU--enabled QR
gpuSvmPredict

A support vector machine style binary classifier
gpuQr

Estimate the QR decomposition for a matrix
gpuGranger

Perform Granger Causality Tests for Vectors on a GPU
gpuLm.defaultTol

Function to switch tolerance depending on precision