grantham_distances_matrix

<p>A dataset containing Grantham distances in the format of a matrix. These
values were obtained from Table 2,  Grantham (1974),
tools:::Rd_expr_doi("10.1126/science.185.4154.862").</p>

datasets

A minimal set of routines to calculate the Grantham distance
<doi:10.1126/science.185.4154.862>. The Grantham distance attempts to
provide a proxy for the evolutionary distance between two amino acids
based on three key chemical properties: composition, polarity and
molecular volume. In turn, evolutionary distance is used as a proxy for
the impact of missense mutations. The higher the distance, the more
deleterious the substitution is expected to be.

Ramiro Magno

grantham

Calculate the Grantham Distance

Isabel Duarte

Ana-Teresa Maia

University of Algarve 

CINTESIS 

Pattern Institute 

grantham_distances_matrix function

<p>An object of class <code>matrix</code> (inherits from <code>array</code>) with 20 rows and 20 columns.</p>

Format

Grantham distance matrix — grantham_distances_matrix

Grantham distance matrix

grantham_distances_matrix: Grantham distance matrix

Description

Usage

Arguments

Format

Examples