prepareSPIA

prepareSPIA,list-method

a <code><links4class>PathwayList</links4class></code> object or a list of
    <code><links4class>Pathway</links4class></code>s.

pathwaySetName

print pathway names as the conversion advances.

print.names

Prepare pathway dataset needed by runSPIA. See <code><a href="/link/runSPIA?package=graph&version=1.50.0" rd-options="" data-mini-rdoc="graph::runSPIA">runSPIA</a></code> and
  <code><a href="/link/spia?package=graph&version=1.50.0&to=SPIA%3Aspia" rd-options="SPIA:spia" data-mini-rdoc="SPIA:spia::spia">spia</a></code> for more details.

A package that implements some simple graph handling
capabilities.

Bioconductor Package Maintainer

graph

graph: A package to handle graph data structures

prepareSPIA function

a <code><linkS4class>PathwayList</linkS4class></code> object or a list of
    <code><linkS4class>Pathway</linkS4class></code>s.

Prepare pathway dataset needed by runSPIA. See <code><a href="runSPIA" rd-options="">runSPIA</a></code> and
  <code><a href="spia" rd-options="SPIA:spia">spia</a></code> for more details.

prepareSPIA: Prepare pathway dataset needed by runSPIA.

Description

Usage

Arguments

References

See Also