convertIdentifiers

a pathway from <a rd-options="" href="/link/biocarta?package=graphite&version=1.12.0" data-mini-rdoc="graphite::biocarta">biocarta</a>, <a rd-options="" href="/link/kegg?package=graphite&version=1.12.0" data-mini-rdoc="graphite::kegg">kegg</a>,
    <a rd-options="" href="/link/nci?package=graphite&version=1.12.0" data-mini-rdoc="graphite::nci">nci</a> or <a rd-options="" href="/link/reactome?package=graphite&version=1.12.0" data-mini-rdoc="graphite::reactome">reactome</a>.

pathway

the type of identifier: either "entrez" or "symbol".

type


  Converts the node identifiers of a pathway to either Entrez Genes of Gene Symbols.


Graph objects from pathway topology derived from Biocarta,
HumanCyc, KEGG, NCI, Panther, Reactome and SPIKE databases.

Gabriele Sales

graphite

GRAPH Interaction from pathway Topological Environment

convertIdentifiers function

a pathway from <a rd-options='' href='biocarta'>biocarta</a>, <a rd-options='' href='kegg'>kegg</a>,
    <a rd-options='' href='nci'>nci</a> or <a rd-options='' href='reactome'>reactome</a>.

convertIdentifiers: Convert the node identifiers of a pathway.

Description

Usage

Arguments

Value

See Also

Examples