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greybox

The package greybox contains functions for model building, which is currently done via the model selection and combinations based on information criteria. The resulting model can then be used in analysis and forecasting.

There are several groups of functions in the package.

Regression model functions

  1. alm - advanced linear regression model that implements likelihood estimation of parameters for Normal, Laplace, Asymmetric Laplace, Logistic, Student's t, S, Folded Normal, Log Normal, Box-Cox Normal, Inverse Gaussian, Chi-Squared, Beta, Poisson, Negative Binomial, Cumulative Logistic and Cumulative Normal distributions. In a sense this is similar to glm() function, but with a different set of distributions and with a focus on forecasting.
  2. stepwise - function implements stepwise IC based on partial correlations.
  3. lmCombine - function combines the regression models from the provided data, based on IC weights and returns the combined alm object.

Exogenous variables transformation functions

  1. xregExpander - function produces lags and leads of the provided data.
  2. xregTransformer - function produces non-linear transformations of the provided data (logs, inverse etc).
  3. xregMultiplier - function produces cross-products of the variables in the matrix. Could be useful when exploring interaction effects of dummy variables.

The data analysis functions

  1. cramer - calculates Cramer's V for two categorical variables. Plus tests the significance of such association.
  2. mcor - function returns the coefficients of multiple correlation between the variables. This is useful when measuring association between categorical and numerical variables.
  3. association (aka 'assoc()') - function returns matrix of measures of association, choosing between cramer(), mcor() and cor() depending on the types of variables.
  4. determination (aka 'determ()') - function returns the vector of coefficients of determination (R^2) for the provided data. This is useful for the diagnostics of multicollinearity.
  5. tableplot - plots the graph for two categorical variables.
  6. spread - plots the matrix of scatter / boxplot / tableplot diagrams - depending on the type of the provided variables.
  7. graphmaker - plots the original series, the fitted values and the forecasts.

Models evaluation functions

  1. ro - rolling origin evaluation (see the vignette).
  2. rmc - Regression for Multiple Comparison of forecasting methods. Can be used, for example, when RelMAE is calculated for several forecasting methods and an analysis of statistical significance in accuracy of methods needs to be carried out. This can be especially useful when you have a lot of methods to compare. The test is faster than Nemenyi in this case and becomes more powerful and accurate.
  3. measures - the error measures for the provided forecasts. Includes MPE, MAPE, MASE, sMAE, sMSE, RelMAE, RelRMSE, MIS, sMIS, RelMIS, pinball and others.

Distribution functions:

  1. qlaplace, dlaplace, rlaplace, plaplace - functions for Laplace distribution.
  2. qalaplace, dalaplace, ralaplace, palaplace - functions for Asymmetric Laplace distribution.
  3. qs, ds, rs, ps - functions for S distribution.
  4. qfnorm, dfnorm, rfnorm, pfnorm - functions for folded normal distribution.
  5. qtplnorm, dtplnorm, rtplnorm, ptplnorm - functions for three parameter log normal distribution.
  6. qbcnorm, dbcnorm, rbcnorm, pbcnorm - functions for Box-Cox normal distribution (discussed in Box & Cox, 1964).

Methods for the introduced and some existing classes:

  1. pointLik - point likelihood method for the time series models.
  2. pAIC, pAICc, pBIC, pBICc - respective point values for the information criteria, based on pointLik.
  3. summary - returns summary of the regression (either selected or combined).
  4. vcov - covariance matrix for combined models. This is an approximate thing. The real one is quite messy and not yet available.
  5. confint - confidence intervals for combined models.
  6. predict, forecast - point and interval forecasts for the response variable. forecast method relies on the parameter h (the forecast horizon), while predict is focused on the newdata. See vignettes for the details.
  7. nParam - returns number of estimated parameters in the model (including variance, location, shift).
  8. getResponse - returns the response variable from the model.
  9. plot - plots several graphs for the analysis of the residuals (see documentation for more details).
  10. AICc - AICc for regression with normally distributed residuals.
  11. BICc - BICc for regression with normally distributed residuals.
  12. is.greybox, is.alm etc. - functions to check if the object was generated by respective functions.

Experimental functions:

  1. lmDynamic - linear regression with time varying parameters based on pAIC.

Installation

The stable version of the package is available on CRAN, so you can install it by running:

install.packages("greybox")

A recent, development version, is available via github and can be installed using "devtools" in R. First make sure that you have devtools:

if (!require("devtools")){install.packages("devtools")}

and after that run:

devtools::install_github("config-i1/greybox")

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Version

Install

install.packages('greybox')

Monthly Downloads

6,933

Version

0.5.8

License

GPL (>= 2)

Issues

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Maintainer

Ivan Svetunkov

Last Published

February 8th, 2020

Functions in greybox (0.5.8)

MAE

Error measures
errorType

Functions that extracts type of error from the model
dalaplace

Asymmetric Laplace Distribution
measures

Error measures for the provided forecasts
alm

Advanced Linear Model
lmCombine

Combine regressions based on information criteria
hm

Half moment of a distribution and its derivatives.
greybox

Grey box
association

Measures of association
AICc

Corrected Akaike's Information Criterion and Bayesian Information Criterion
actuals

Function extracts the actual values from the function
dbcnorm

Box-Cox Normal Distribution
determination

Determination coefficients
pointLik

Point likelihood values
polyprod

This function calculates parameters for the polynomials
mcor

Multiple correlation
pcor

Partial correlations
cramer

Calculate Cramer's V for categorical variables
is.greybox

Greybox classes checkers
dtplnorm

Three Parameter Log Normal Distribution
predict.alm

Forecasting using greybox functions
dlaplace

Laplace Distribution
pAIC

Point AIC
lmDynamic

Combine regressions based on point information criteria
nparam

Number of parameters in the model
ds

S Distribution
dfnorm

Folded Normal Distribution
xregExpander

Exogenous variables expander
ro

Rolling Origin
stepwise

Stepwise selection of regressors
rmc

Regression for Multiple Comparison
pinball

Pinball function
spread

Construct scatterplot / boxplots for the data
graphmaker

Linear graph construction function
tableplot

Construct a plot for categorical variable
plot.greybox

Plots of the fit and residuals
xregMultiplier

Exogenous variables cross-products
xregTransformer

Exogenous variables transformer