compute.db

this function is called by 'compute.kld' to aggregate the density contribution
of each gene to each grid point, and then normalize the densities of grid points
to 1.

Analysis frameworks for pathway heterogeneity and pathway activity evaluation in single-cell data, including scRNA-seq data and spatial genomics data.

Qingnan, Liang 

gsdensity

Density-Based Gene Set Specificity Evaluation

Ken Chen

compute.db function

<dl><dt>density.df</dt>
<dd>an intermediate object in 'compute.kld'</dd></dl>

Arguments

this function is called by 'compute.kld' to aggregate the density contribution
of each gene to each grid point, and then normalize the densities of grid points
to 1. — compute.db

<dl>

<dt>density.df</dt>
<dd>an intermediate object in 'compute.kld'</dd>

</dl>

this function is called by 'compute.kld' to aggregate the density contribution
of each gene to each grid point, and then normalize the densities of grid points
to 1.

compute.db: this function is called by 'compute.kld' to aggregate the density contribution of each gene to each grid point, and then normalize the densities of grid points to 1.

Description

Usage

Value

Arguments