seed.mat.list

this function is used when more than one 'seed sets' will be used (when there
are multiple gene sets of interest)

Analysis frameworks for pathway heterogeneity and pathway activity evaluation in single-cell data, including scRNA-seq data and spatial genomics data.

Qingnan, Liang 

gsdensity

Density-Based Gene Set Specificity Evaluation

Ken Chen

seed.mat.list function

<dl><dt>gene_set_list</dt>
<dd>gene_set_list</dd>
<dt>graph.use</dt>
<dd>graph.use</dd></dl>

Arguments

this function is used when more than one 'seed sets' will be used (when there
are multiple gene sets of interest) — seed.mat.list

<dl>

<dt>gene_set_list</dt>
<dd>gene_set_list</dd>


<dt>graph.use</dt>
<dd>graph.use</dd>

</dl>

seed.mat.list: this function is used when more than one 'seed sets' will be used (when there are multiple gene sets of interest)

Description

Usage

Value

Arguments