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gwaRs

an R package for generating Manhattan, Q-Q, and PCA plots from GWAS and PCA results using ggplot2

Installation

Install the stable release from CRAN:

install.packages("gwaRs")

Or install directly from GitHub using devtools

library(devtools)
install_github("LindoNkambule/gwaRs")

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Version

Install

install.packages('gwaRs')

Monthly Downloads

214

Version

0.3.0

License

MIT + file LICENCE

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Maintainer

Lindokuhle Nkambule

Last Published

April 19th, 2021

Functions in gwaRs (0.3.0)

gwaRs

Create Manhattan, Q-Q, and PCA plots for GWAS data.
qq_plot

QQ Plot
mirrored_man_plot

Mirrored Manhattan Plot
man_plot

Manhattan Plot
gwasData

GWAS results
pca_plot

PCA Plot
karyotype_plot

Karyotype Plot
pcaData

PCA results
highlightSNPS

Highlight SNPs