get_variants_by_cytogenetic_band

Gets variants that are mapped onto specific regions as specified by
cytogenetic bands. See the dataframe
<code>cytogenetic_bands</code> for more information on possible
values.

internal

'GWAS' R 'API' Data Download.
This package provides easy access to the 'NHGRI'-'EBI' 'GWAS' Catalog data by
accessing the 'REST' 'API' <https://www.ebi.ac.uk/gwas/rest/docs/api/>.

Ramiro Magno

gwasrapidd

'REST' 'API' Client for the 'NHGRI'-'EBI' 'GWAS' Catalog

Ana-Teresa Maia

CINTESIS 

Pattern Institute 

get_variants_by_cytogenetic_band function

<dl><dt>cytogenetic_band</dt>
<dd>A <code>character</code> vector of cytogenetic bands of the
form <code>'1p36.11'</code></dd>
<dt>verbose</dt>
<dd>Whether the function should be verbose about the different
queries or not.</dd>
<dt>warnings</dt>
<dd>Whether to print warnings.</dd>
<dt>page_size</dt>
<dd>An integer scalar indicating the
<a href="https://www.ebi.ac.uk/gwas/rest/docs/api#_paging_resources">page</a>
value to be used in the JSON requests, can be between <code>1</code> and
<code>1000</code>.</dd></dl>

Arguments

Get GWAS Catalog variants by cytogenetic band. — get_variants_by_cytogenetic_band

<dl>

<dt>cytogenetic_band</dt>
<dd>A <code>character</code> vector of cytogenetic bands of the
form <code>'1p36.11'</code></dd>


<dt>verbose</dt>
<dd>Whether the function should be verbose about the different
queries or not.</dd>


<dt>warnings</dt>
<dd>Whether to print warnings.</dd>


<dt>page_size</dt>
<dd>An integer scalar indicating the
<a href='https://www.ebi.ac.uk/gwas/rest/docs/api#_paging_resources'>page</a>
value to be used in the JSON requests, can be between <code>1</code> and
<code>1000</code>.</dd>

</dl>

get_variants_by_cytogenetic_band: Get GWAS Catalog variants by cytogenetic band.

Description

Usage

Value

Arguments