sample_meta

Metadata to accompany internal data from a Phytophthora sojae survey used
for an example in the "Beta-diversity Analyses" vignette.

datasets

Analysis of plant pathogen pathotype survey data. Functions
provided calculate distribution of susceptibilities, distribution of
complexities with statistics, pathotype frequency distribution, as
well as diversity indices for pathotypes. This package is meant to be
a direct replacement for Herrmann, Löwer and Schachtel's (1999)
<doi:10.1046/j.1365-3059.1999.00325.x> Habgood-Gilmour Spreadsheet,
'HaGiS', previously used for pathotype analysis.

Adam Sparks

hagis

Analysis of Plant Pathogen Pathotype Complexities, Distributions
and Diversity

Austin G. McCoy

Zachary Noel

Adam H. Sparks

Martin Chilvers

Jari Oksanen

Zhian N. Kamvar

Michigan Soybean Promotion Committee 

Project GREEEN 

North Central Soybean Research Program 

GRDC Project DAQ00186 

sample_meta function

An object of class <code>data.frame</code> with 21 observations of 2 variables<dl>
<dt>Sample</dt>
<dd>P. sojae sample identifier</dd><dt>Locale</dt>
<dd>US State where sample was collected, limited to Michigan</dd>
</dl>

Format

Phytophthora sojae Survey Example Metadata — sample_meta

An object of class <code>data.frame</code> with 21 observations of 2 variables<dl>
<dt>Sample</dt>
<dd>P. sojae sample identifier</dd>

<dt>Locale</dt>
<dd>US State where sample was collected, limited to Michigan</dd>


</dl>

Phytophthora sojae Survey Example Metadata

sample_meta: Phytophthora sojae Survey Example Metadata

Description

Usage

Arguments

Format

Examples