hamlet (version 0.9.6)

mem.plotresid: Plot residuals of a mixed-effects model along with trend lines

Description

This function plots stylized residuals of a mixed-effects model. It is possible to obtain fitted values versus errors (XbZu vs e), or original values versus errors (y vs e) in order to obtain different views to the errors in connection to the observations.

Usage

mem.plotresid(fit, linear = T, type = "XbZu", main, xlab, ylab)

Arguments

fit

A fitted mixed-effects model generated either through the lme4 or the nlme package.

linear

Should linear trend lines be drawn to the residual plot

type

Type of residual plot; should fitted values (value "XbZu") or original observations (value "y") be plotted against "e" errors

main

Main title

xlab

x-axis label

ylab

y-axis label

Details

Notice that the typical residual plot is fitted values (type="XbZu") versus errors ("e").

See Also

mem.getcomp, mem.plotran

Examples

# NOT RUN {
data(vcaplong)

exdat <- vcaplong[vcaplong[,"Group"] %in% c("Vehicle", "ARN"),]

library(lme4)
f0 <- lmer(log2PSA ~ 1 + DrugWeek + (1 + DrugWeek|ID), data = exdat)
f1 <- lmer(log2PSA ~ 1 + DrugWeek + DrugWeek:ARN + (1 + DrugWeek|ID), data = exdat)
f2 <- lmer(log2PSA ~ 1 + DrugWeek + DrugWeek:ARN + (1|ID) + (0 + DrugWeek|ID), data = exdat)
f3 <- lmer(log2PSA ~ 1 + DrugWeek + DrugWeek:ARN + (1|Submatch) + (0 + DrugWeek|ID), data = exdat)

par(mfrow=c(2,2))
mem.plotresid(f0)
mem.plotresid(f1)
mem.plotresid(f2)
mem.plotresid(f3)

# }