⚠️There's a newer version (1.2-9) of this package.Take me there.
hapassoc (version 1.2-1)
Inference of trait associations with SNP haplotypes and other attributes using the EM Algorithm
Description
The following R functions are used for inference of trait associations with haplotypes and other covariates in generalized linear models. The functions are developed primarily for data collected in cohort or cross-sectional studies. They can accommodate uncertain haplotype phase and handle missing genotypes at some SNPs.