haplo.ccs v1.2

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by Benjamin French

Estimate Haplotype Relative Risks in Case-Control Data

'haplo.ccs' estimates haplotype and covariate relative risks in case-control data by weighted logistic regression. Diplotype probabilities, which are estimated by EM computation with progressive insertion of loci, are utilized as weights.

Functions in haplo.ccs

Name Description
renin Example Dataset for 'haplo.ccs'
haplo.hpp Obtain Summaries of Phase Ambiguity
sandcov Compute Sandwich Variance-Covariance Estimates
haplo Specify an Allele Matrix, Inheritance Mode, and Grouping for Rare Haplotypes
haplo.ccs Estimate Haplotype Relative Risks in Case-Control Data
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Type Package
Date 2006-08-23
License GNU GPL version 2 or newer
Packaged Wed Aug 23 14:20:47 2006; bcf

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