dna.obj

An example object of the class <code><a rd-options="" href="/link/Dna?package=haplotypes&version=1.0" data-mini-rdoc="haplotypes::Dna">Dna</a></code>.

datasets

DNA ANALYSIS

Provides S4 classes and methods for reading and manipulating aligned DNA sequences, supporting an indel coding methods (only simple indel coding method is available in the current version), showing base substitutions and indels, calculating absolute pairwise distances between DNA sequences, and inferring haplotypes from DNA sequences or user provided absolute character difference matrix.  This package also includes S4 classes and methods for estimating genealogical relationships among haplotypes using statistical parsimony.

Caner Aktas

haplotypes

Haplotype Inference and Statistical Analysis of Genetic
Variation

dna.obj function

<code>dna.obj</code> contains a <code><a rd-options="" href="/link/Dna?package=haplotypes&version=1.0" data-mini-rdoc="haplotypes::Dna">Dna</a></code> object.

Format

An example object of the class <code><a rd-options='' href='Dna'>Dna</a></code>.

Example DNA sequence data — dna.obj

<code>dna.obj</code> contains a <code><a rd-options='' href='Dna'>Dna</a></code> object.

dna.obj: Example DNA sequence data

Description

Usage

Arguments

Format

Examples