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heemod (version 0.4.0)

run_models_tabular: Run Analyses From Files

Description

This function runs a model from tabular input.

Usage

run_models_tabular(location, reference = "REFERENCE.csv", run_psa = TRUE, run_demo = TRUE, save = FALSE, overwrite = FALSE)

Arguments

location
Directory where the files are located.
reference
Name of the reference file.
run_psa
Run PSA?.
run_demo
Run demgraphic analysis?
save
Should the outputs be saved?
overwrite
Should the outputs be overwritten?

Value

A list of evaluated models (always), and, if appropriate input is provided, dsa (deterministic sensitivity analysis), psa (probabilistic sensitivity analysis) and demographics (results across different demographic groups).

Details

The reference file should have two columns, data and file. An optional absolute_path column can be added, having value TRUE where an absolute file path is provided. data values must include state, tm, and parameters, and can also include options, demographics and data. The corresponding values in the file column give the names of the files (located in base_dir) that contain the corresponding information - or, in the case of data, the directory containing the tables to be loaded.