vennD

vennD-methods

vennD,highTtest,numeric-method

Generates 2- or 3-dimensional Venn diagrams comparing the
features selected by the Cao-Kosorok method to those selected
by the Storey-Tibshirani (2003) method 
and/or the Benjamini-Hoshberg (1995) method.
This S4 method is simply a wrapper 
for <code>plotVenn2d()</code> and <code>plotVenn3d()</code> of 
package colorfulVennPlot.

methods

Implements the method developed by Cao and Kosorok (2011) for the
significance analysis of thousands of features in high-dimensional
biological studies. It is an asymptotically valid data-driven procedure
to find critical values for rejection regions controlling the
k-familywise error rate, false discovery rate, and the tail probability
of false discovery proportion.

Shannon Holloway

highTtest

Simultaneous Critical Values for t-Tests in Very High Dimensions

Hongyuan Cao

Michael Kosorok

Shannon T. Holloway

vennD-methods function

<dl class="dl-horizontal"><dt><code>signature(x = "highTtest", gamma="numeric", ...)</code></dt><dd>Object returned by a call to <code>highTtest()</code>.
<code>gamma</code> is the level of significance. Additional control variables
for the methods of <code>plotVenn2d()</code> and <code>plotVenn3d()</code> of 
package colorfulVennPlot can be passed through the ellipsis.</dd>
</dl>

Methods

~~ Methods for Function <code>vennD</code> ~~ — vennD-methods

~~ Methods for Function <code>vennD</code> ~~

vennD-methods: Methods for Function `vennD`

Description

Arguments

Methods