get.term.descendancy.matrix: Get logical descendancy matrix for set of terms

Description

Get logical descendancy matrix for set of terms

Usage

get.term.descendancy.matrix(hpo.terms, terms = NULL, rows = terms, cols = terms)

Arguments

hpo.terms

R-Object representation of HPO

terms

Character vector of HPO terms

rows

Rows for resultant matrix (defaults to terms)

cols

Cols for resultant matrix (defaults to terms)

Value

A logical descendancy matrix of terms by terms based on DAG structure of HPO, where by the row term is an ancestor of the column term if result[row.term,col.term] == TRUE

Examples

Run this code

data(hpo.terms)
get.term.descendancy.matrix(hpo.terms, c("HP:0001873", "HP:0011877"))

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