hpoPlot (version 2.4)

remove.uninformative.for.plot: Remove uninformative terms (fitting plotting filter format)

Description

Remove uninformative terms (fitting plotting filter format)

Usage

remove.uninformative.for.plot(hpo.terms, terms = get.ancestors(hpo.terms, unlist(plotting.context$hpo.phenotypes)), plotting.context)

Arguments

hpo.terms

R-Object representation of HPO

terms

Character vector of HPO terms

plotting.context

List object with hpo.phenotypes slot for list of character vectors of terms

Value

Character vector

See Also

remove.terms.with.less.than.n.occurrences, n.most.frequent.terms

Examples

data(hpo.terms)
remove.uninformative.for.plot(hpo.terms, 
c("HP:0001873"), list(hpo.phenotypes=list("HP:0001873", "HP:0001902")))