para

<code>list</code> list of matrices of half-sibs (can be generated with <code><a rd-options="" href="/link/hss?package=hsphase&version=2.0.1" data-mini-rdoc="hsphase::hss">hss</a></code> and <code><a rd-options="" href="/link/cs?package=hsphase&version=2.0.1" data-mini-rdoc="hsphase::cs">cs</a></code> functions)

halfsibs

<code>numeric</code> number of CPUs (thread)

cpus

<code>character</code> type of analysis

option

<code>character</code>
 type of cluster for parallel analysis

type

<code>integer</code> number of heterozygous sites used to validate recombination events or check for genotyping errors

bmh_forwardVectorSize

<code>logical</code> exclude SNPs that may cause heterozygous sites in the sire due to genotyping errors or map errors

bmh_excludeFP

<code>integer</code> number of SNPs per block

bmh_nsap

<code>character</code> method for creating the recombination matrix

pmMethod

This function uses the list of matrices (the output of <code><a rd-options="" href="/link/cs?package=hsphase&version=2.0.1" data-mini-rdoc="hsphase::cs">cs</a></code>) and runs one of the options, on each element of the list, in parallel.

opposing-homozygote

Identification of recombination events, haplotype reconstruction, sire imputation and pedigree reconstruction using half-sib family SNP data

Mohammad Ferdosi

hsphase

Phasing, Pedigree Reconstruction, Sire Imputation and
Recombination Events Identification of Half-sib Families Using
SNP Data

para function

<code>list</code> list of matrices of half-sibs (can be generated with <code><a rd-options='' href='hss'>hss</a></code> and <code><a rd-options='' href='cs'>cs</a></code> functions)

This function uses the list of matrices (the output of <code><a rd-options='' href='cs'>cs</a></code>) and runs one of the options, on each element of the list, in parallel.

para: Parallel Analysis of Data

Description

Usage

Arguments

Value

Details

Examples