pedigreeNaming

Tries to link the inferred pedigree from <code>rpoh</code> with sire IDs in the original pedigree and fix pedigree errors.

inference

pedigree

Identification of recombination events, haplotype reconstruction, sire imputation and pedigree reconstruction using half-sib family SNP data.

Mohammad Ferdosi

hsphase

Phasing, Pedigree Reconstruction, Sire Imputation and
Recombination Events Identification of Half-sib Families Using
SNP Data

Cedric Gondro

pedigreeNaming function

<dl> <dt>inferredPedigree</dt>
<dd><code>matrix</code>. Inferred pedigree (output of <code>rpoh</code>).</dd> <dt>realPedigree</dt>
<dd><code>matrix</code>. Original pedigree.</dd></dl>

Arguments

Fix Pedigree Errors — pedigreeNaming

<dl>

 <dt>inferredPedigree</dt>
<dd><code>matrix</code>. Inferred pedigree (output of <code>rpoh</code>).</dd>

 <dt>realPedigree</dt>
<dd><code>matrix</code>. Original pedigree.</dd>

</dl>

pedigreeNaming: Fix Pedigree Errors

Description

Usage

Value

Arguments

Details

See Also

Examples