coreloop

Core optimization loop of hypergate

Given a high-dimensional dataset that typically represents a cytometry dataset, and a subset of the datapoints, this algorithm outputs an hyperrectangle so that datapoints within the hyperrectangle best correspond to the specified subset. In essence, this allows the conversion of clustering algorithms' outputs to gating strategies outputs.

Etienne Becht

hypergate

Machine Learning of Hyperrectangular Gating Strategies for
High-Dimensional Cytometry

Samuel Granjeaud

coreloop function

<dl><dt>par</dt>
<dd>Current parametrization of the hyperrectangle</dd>
<dt>hg.env</dt>
<dd>Environment where the main execution of hypergate takes place</dd></dl>

Arguments

coreloop — coreloop

<dl>

<dt>par</dt>
<dd>Current parametrization of the hyperrectangle</dd>


<dt>hg.env</dt>
<dd>Environment where the main execution of hypergate takes place</dd>

</dl>

coreloop: coreloop

Description

Usage

Arguments