hgate_rule

Build a human readable rule i.e. a combination of channels, sign
 of comparison and threshold.

Given a high-dimensional dataset that typically represents a cytometry dataset, and a subset of the datapoints, this algorithm outputs an hyperrectangle so that datapoints within the hyperrectangle best correspond to the specified subset. In essence, this allows the conversion of clustering algorithms' outputs to gating strategies outputs.

Etienne Becht

hypergate

Machine Learning of Hyperrectangular Gating Strategies for
High-Dimensional Cytometry

Samuel Granjeaud

hgate_rule function

<dl><dt>hgate</dt>
<dd>A hypergate object (produced by hypergate())</dd>
<dt>collapse</dt>
<dd>A character string to separate the markers.</dd>
<dt>digits</dt>
<dd>An integer that specifies the decimal part when rounding.</dd></dl>

Arguments

hgate_rule — hgate_rule

<dl>

<dt>hgate</dt>
<dd>A hypergate object (produced by hypergate())</dd>


<dt>collapse</dt>
<dd>A character string to separate the markers.</dd>


<dt>digits</dt>
<dd>An integer that specifies the decimal part when rounding.</dd>

</dl>

hgate_rule: hgate_rule

Description

Usage

Value

Arguments

See Also

Examples