find_optimal_occupancy_thin
Find optimal parameters to calculate occupancy
get_occupancy_volume_bootstrap
Extract the volume from occupancy bootstrap objects
Extract the relative volume
get_occupancy_unshared_bootstrap
Volume of the unshared fraction of a bootstrapped occupancy object
Distance between two hypervolumes
Concatenate hypervolumes
hypervolume_inclusion_test
Inclusion test
hypervolume_estimate_probability
Estimate probability a given location
Hypervolume construction via Gaussian kernel density estimation
Hypervolumes at different sample sizes
Hypervolume construction methods
Hypervolume construction via hyperbox kernel density estimation
hypervolume_general_model
Generates hypervolume by sampling from arbitrary model object.
Hole detection
Hypervolumes through permuting data of two hypervolumes
Bootstrap n hypervolumes
hypervolume_n_occupancy_test
Significance of random points occupancy
Null distribution for overlap statistics
hypervolume_n_occupancy_permute
Hypervolumes through permuting labels of n pairwise groups of hypervolumes
Operations for groups of hypervolumes
hypervolume_overlap_confidence
Confidence intervals for overlap statistics
hypervolume_overlap_statistics
Overlap statistics for set operations (Sorensen, Jaccard, etc.)
Removes small hypervolumes from a HypervolumeList
Geographical projection of hypervolume for species distribution modeling, using the hypervolume as the environmental niche model.
Hypervolume construction via one-class support vector machine (SVM) learning model
Thresholds hypervolume and calculates volume quantile statistics (empirical cumulative distribution function)
hypervolume_save_animated_gif
Saves animated GIF of three-dimensional hypervolume plot.
Redundancy of a point in a hypervolume
Reduces the number of random points in a hypervolume
Set operations (intersection / union / unique components)
hypervolume_set_n_intersection
Multi-way set intersection
Segments a hypervolume into multiple separate hypervolumes.
Hypervolume resampling methods
Plot a hypervolume or list of hypervolumes
hypervolume_to_data_frame
Convert hypervolumes to data.frame
Union of hypervolumes from an occupancy object
Summary of hypervolume
Print summary of hypervolume
Generates axis-wise range limits with padding
Unshared fraction from an occupancy object
Data and demo for Quercus (oak) tree distributions
occupancy_to_intersection
Get the intersection of an occupancy object
Subset occupancy hypervolumes
hypervolume_variable_importance
Hypervolume variable importance
Morphological data for Darwin's finches
Goodness of fit metrics for bootstrapped occupancy objects
Abundance weighting and prior of data for hypervolume input
Read hypervolumes from directory
Class "HypervolumeList"
Class "Hypervolume"
Hyperbox expectation
Convex expectation
Generate hypervolumes using pre-existing parameters
Hypersphere expectation
Maximal expectation
Kernel bandwidth estimators for hypervolumes
get_occupancy_intersection_bootstrap
Volume of the intersection of a bootstrapped occupancy object
Data for Acacia and Pinus tree distributions
tools:::Rd_package_title("hypervolume")
Circles simulated dataset
Stats from occupancy objects
Get weighted centroid of hypervolume or hypervolume list
Extract volume
Get centroid of hypervolume or hypervolume list