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iASeq (version 1.16.0)

iASeq: integrating multiple sequencing datasets for detecting allele-specific events

Description

It fits correlation motif model to multiple RNAseq or ChIPseq studies to improve detection of allele-specific events and describe correlation patterns across studies.

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Version

Version

1.16.0

License

GPL-2

Maintainer

Yingying Wei

Last Published

February 15th, 2017

Functions in iASeq (1.16.0)

plotMotif

Correlation Motif Plot
plotBIC

BIC Plot
sampleASE

Example Dataset for iASeq
iASeq-package

iASeq: integrating multiple sequencing datasets for detecting allele-specific events
singleEMfit

Single Study EM Fit for Allele Specific Events
iASeq internal

iASeq Internal Functions
iASeqmotif

Correlation Motif Fit for Allele Specific Events
ASErawfit

Single Study Based Statistics for Allele Specific Events