iCellR (version 1.6.1)

prep.vdj: Prepare VDJ data

Description

This function takes a data frame of VDJ data per cell and prepares it to adds it to the iCellR object.

Usage

prep.vdj(vdj.data = "data.frame", cond.name = "NULL")

Arguments

vdj.data

A data frame containing vdj information.

cond.name

Conditions.

Value

An object of class iCellR

Examples

# NOT RUN {
my.vdj <- read.csv(file = system.file('extdata', 'all_contig_annotations.csv',
          package = 'iCellR'),
          as.is = TRUE)
head(my.vdj)
dim(my.vdj)

My.VDJ <- prep.vdj(vdj.data = my.vdj, cond.name = "NULL")
head(My.VDJ)
dim(My.VDJ)

# }