iCellR (version 1.6.1)

vdj.stats: VDJ stats

Description

This function takes a data frame of VDJ info per cell and dose QC.

Usage

vdj.stats(my.vdj = "data.frame")

Arguments

my.vdj

A data frame containing VDJ data for cells.

Value

An object of class iCellR

Examples

# NOT RUN {
my.vdj <- read.csv(file = system.file('extdata', 'all_contig_annotations.csv',
          package = 'iCellR'),
          as.is = TRUE)
head(my.vdj)
dim(my.vdj)

My.VDJ <- prep.vdj(vdj.data = my.vdj, cond.name = "NULL")
head(My.VDJ)
dim(My.VDJ)

vdj.stats(My.VDJ)

# }