brca

datasets

Fits covariate dependent partial correlation matrices for integrative models to identify differential networks between two groups. The methods are described in Class et. al., (2018) <doi:10.1093/bioinformatics/btx750> and Ha et. al., (2015) <doi:10.1093/bioinformatics/btv406>.

Caleb Class

iDINGO

Integrative Differential Network Analysis in Genomics

brca function

<p>Three data frames, with columns as standardized miRNA, gene, and protein expressions. One vector with the two classes of the samples (tumor or normal tissue). Also one iDINGO fit object, obtained by running the example in the idingo manual entry.</p>

brca: Modified TCGA Breast Cancer data

Description

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