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iFad (version 2.0)

An integrative factor analysis model for drug-pathway association inference

Description

This package implements a bayesian sparse factor model for the joint analysis of paired datasets, one is the gene expression dataset and the other is the drug sensitivity profiles, measured across the same panel of samples, e.g., cell lines. Prior knowledge about gene-pathway associations can be easily incorporated in the model to aid the inference of drug-pathway associations.

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Install

install.packages('iFad')

Monthly Downloads

32

Version

2.0

License

GPL (>= 2)

Maintainer

Last Published

October 29th, 2012

Functions in iFad (2.0)