matrixW1

The factor loading matrix representing the degree of 
        influence of the latent factors on individual genes. Dim(matrixW1)=G1*K; 
        Real continuous value with mean 0 and SD 1.

datasets

This package implements a Bayesian sparse factor model for the joint analysis of paired datasets, one is the gene expression dataset and the other is the drug sensitivity profiles, measured across the same panel of samples, e.g., cell lines. Prior knowledge about gene-pathway associations can be easily incorporated in the model to aid the inference of drug-pathway associations.

Haisu Ma

iFad

An integrative factor analysis model for drug-pathway
association inference

matrixW1 function

The format is:
 num [1:30, 1:10] 0 0 1.76 0 0 ...

matrixW1: The factor loading matrix representing the gene-pathway association

Description

Usage

Arguments

Format

Examples