matrixY2

The drug sensitivity matrix, dim(Y2)=G2*J. 
G2 is the number of drugs, J is the number of samples.

datasets

This package implements a Bayesian sparse factor model for the joint analysis of paired datasets, one is the gene expression dataset and the other is the drug sensitivity profiles, measured across the same panel of samples, e.g., cell lines. Prior knowledge about gene-pathway associations can be easily incorporated in the model to aid the inference of drug-pathway associations.

Haisu Ma

iFad

An integrative factor analysis model for drug-pathway
association inference

matrixY2 function

The format is:
 num [1:30, 1:15] -0.157 -1.994 -0.339 -1.224 0.622 ...

matrixY2: The drug sensitivity matrix

Description

Usage

Arguments

Format

Examples