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ibdreg (version 0.2.2)

plot.ibdreg.unexpect: Plot unconstrained and constrained linkage tests to indicate areas of unexpected allele sharing

Description

Plot the -log10(pvalue) of the unconstrained and constrained linkage tests to indicate areas of unexpected allele sharing

Usage

## S3 method for class 'ibdreg.unexpect':
plot(x, status.method="AA", ...)

Arguments

x
an ibdreg object
status.method
Character string indicating which affection status for relative pairs ("AA", "AU", or "UU") is to be examined for unexpected IBD sharing. Character string indicating which relative pairs to display linkage tests for: "AA", "AU", or "UU". These correspond
...
extra parameters for the plot method. This method looks for a 'title' parameter.

Value

  • nothing is returned

See Also

plot.ibdreg, ibdreg