dfMarkStyle

dfMarkColor

humMarkColor

mydfMaColor

style column does not apply to cen. marks, only color.
dfMarkColor: Example General data for marks NOT position
humMarkColor: human mark characteristics
mydfMaColor: mark characteristics used in vignette of phylogeny

datasets

Plot idiograms of several karyotypes having a set of data.frames for chromosome data
and optionally mark data. Supports micrometers and Mb. Marks can have square or dot form,
its legend (label) can be drawn inline or to the right of karyotypes. It is possible to
calculate chromosome indices by Levan et al. (1964) <doi:10.1111/j.1601-5223.1964.tb01953.x>,
karyotype indices of Watanabe et al. (1999) <doi:10.1007/PL00013869> and Romero-Zarco (1986)
<doi:10.2307/1221906> and classify chromosomes by morphology Guerra (1986) and Levan et al.
(1964).

Fernando Roa

idiogramFISH

Idiograms with Marks and Karyotype Indices

Mariana PC Telles 

dfMarkStyle function

dfMarkColor a data.frame with columns:<dl class="dl-horizontal">
<dt>markName</dt><dd>name of mark</dd>
<dt>markColor</dt><dd>use R colors</dd>
<dt>style</dt><dd>character, use square or dots, optional</dd>
</dl>

Format

Mark characteristics — dfMarkStyle

dfMarkColor a data.frame with columns:<dl class='dl-horizontal'>
<dt>markName</dt><dd>name of mark</dd>
<dt>markColor</dt><dd>use R colors</dd>
<dt>style</dt><dd>character, use square or dots, optional</dd>
</dl>

dfMarkStyle: Mark characteristics

Description

Usage

Arguments

Format

References

See Also