immunarch (version 0.10.3)

vis.immunr_public_statistics: Visualise sharing of clonotypes among samples

Description

Visualise public clonotype frequencies.

Usage

# S3 method for immunr_public_statistics
vis(.data, ...)

Value

A ggplot2 object.

Arguments

.data

Public repertoire - an output from the pubRep function.

...

Other arguments passsed directly to UpSetR::upset.

Examples

if (FALSE) {
data(immdata)
immdata$data <- lapply(immdata$data, head, 2000)
pr <- pubRep(immdata$data, .verbose = FALSE)
pubRepStatistics(pr) %>% vis()
}