immunarch (version 0.9.1)

vis.immunr_inc_overlap: Visualise incremental overlaps

Description

Visualise incremental overlaps

Usage

# S3 method for immunr_inc_overlap
vis(.data, .target = 1, .grid = FALSE, .ncol = 2, ...)

Value

A ggplot2 object.

Arguments

.data

Output from the repOverlap function that uses "top" methods.

.target

Index of a repertoire to plot. Omitted if .grid is TRUE.

.grid

Logical. If TRUE then plot all similarities in a grid.

.ncol

Numeric. Number of columns in the resulting grid.

...

Not used here.

See Also

repOverlap

Examples

data(immdata)
tmp <- repOverlap(immdata$data[1:4], "inc+overlap", .verbose.inc = FALSE, .verbose = FALSE)
vis(tmp, .target = 1)
vis(tmp, .grid = TRUE)