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immunoClust (version 1.4.0)

immunoClust - Automated Pipeline for Population Detection in Flow Cytometry

Description

Model based clustering and meta-clustering of Flow Cytometry Data

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Version

Version

1.4.0

License

Artistic-2.0

Maintainer

Till Soerensen

Last Published

February 15th, 2017

Functions in immunoClust (1.4.0)

cell.ClustData

Model Based Clustering of Data for a pre-defined Number of Clusters
meta.SubClustering

immunoClust Model Refinement Step in iterative Meta-clustering
meta.plot

Ploting of immunoClust Meta-clustering Results
cell.SubClustering

immunoClust Model Refinement Step in iterative Cell-events Clustering
dat.exp

immunoClust Meta-clustering Sample
immunoClust-object

immunoClust-Object
trans.FitToData

immunoClust asinh-Transformation Optimization
meta.clustering

Clustering of Cell-clusters in the immunoClust-pipeline
cell.hclust

Hierarchical Model Based Clustering of Cell-events in the immunoClust-pipeline
splom.immunoClust

Scatterplot Matrix of immunoClust Clustering Results
dat.fcs

immunoClust Cell-clustering Sample
cell.EM

immunoClust EMt-iteration on Cell-events given initial Model Parameters
dat.meta

immunoClust Meta-clustering Results Sample
plot.immunoClust

Scatterplot of immunoClust Clustering Results
cell.ME

immunoClust EM-iteration on Cell-events given initial Cluster Membership Assignment
meta.exprs

Collecting Data of an immunoClust vector
cell.process

Clustering of Cell-events in the immunoClust-pipeline
immunoClust-package

immunoClust - Automated Pipeline for Population Detection in Flow Cytometry
meta.hclust

Hierarchical Meta-clustering of Cell-clusters in the immunoClust-pipeline
cell.FitModel

immunoClust EMt-iteration on Cell-events given initial Model Parameters
cell.removed

Brief Information of removed Cell-events by immunoClust Cell-event Clustering
meta.process

Meta-clustering of Cell-clusters in the immunoClust-pipeline
trans.ApplyToData

immunoClust asinh-Transformation
meta.normalize

immunoClust normalization step with the meta.clustering process
meta.ME

immunoClust EM(t)-iteration on Cell-clusters
meta.export

immunoClust Meta-clustering Results Export