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indicspecies (version 1.7.14)

Relationship Between Species and Groups of Sites

Description

Functions to assess the strength and statistical significance of the relationship between species occurrence/abundance and groups of sites [De Caceres & Legendre (2009) ]. Also includes functions to measure species niche breadth using resource categories [De Caceres et al. (2011) ].

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Version

Install

install.packages('indicspecies')

Monthly Downloads

7,372

Version

1.7.14

License

GPL (>= 2)

Maintainer

Miquel Caceres

Last Published

July 20th, 2023

Functions in indicspecies (1.7.14)

multipatt

Multi-level pattern analysis
coverage

Coverage of a set of indicators
predict.indicators

Predicts site group from indicators
indicators

Indicator analysis for species combinations
pruneindicators

Determines the best subset of indicators
nichedispl

Metrics to compare pairs of resource niches
signassoc

Statistical significance of species site-group associations
summary.multipatt

Summarizing multi-level pattern analysis
birds

Birds resource use data
strassoc

Strength of species site-group associations
nichecentroid

Resource niche metrics for a single niche
combinespecies

Combines species from a community table
plotniche

Draws a single resource niche
wetland

Wetland vegetation data set
pigeons

Pigeon seed consumption data