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indicspecies (version 1.7.15)

Relationship Between Species and Groups of Sites

Description

Functions to assess the strength and statistical significance of the relationship between species occurrence/abundance and groups of sites [De Caceres & Legendre (2009) ]. Also includes functions to measure species niche breadth using resource categories [De Caceres et al. (2011) ].

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Version

Install

install.packages('indicspecies')

Monthly Downloads

2,573

Version

1.7.15

License

GPL (>= 2)

Maintainer

Miquel Caceres

Last Published

August 21st, 2024

Functions in indicspecies (1.7.15)

nichecentroid

Resource niche metrics for a single niche
pruneindicators

Determines the best subset of indicators
signassoc

Statistical significance of species site-group associations
pigeons

Pigeon seed consumption data
predict.indicators

Predicts site group from indicators
birds

Birds resource use data
plotniche

Draws a single resource niche
nichedispl

Metrics to compare pairs of resource niches
combinespecies

Combines species from a community table
indicators

Indicator analysis for species combinations
coverage

Coverage of a set of indicators
multipatt

Multi-level pattern analysis
strassoc

Strength of species site-group associations
summary.multipatt

Summarizing multi-level pattern analysis
wetland

Wetland vegetation data set