Learn R Programming

infercnv (version 0.8.2)

require_above_min_mean_expr_cutoff: require_above_min_mean_expr_cutoff ()

Description

Filters out genes that have fewer than the corresponding mean value across all cell values.

Usage

require_above_min_mean_expr_cutoff(infercnv_obj, min_mean_expr_cutoff)

Arguments

infercnv_obj

infercnv_object

min_mean_expr_cutoff

the minimum mean value allowed for a gene to be retained in the expression matrix.

Value

infercnv_obj the infercnv_object with lowly or unexpressed genes removed.