Learn R Programming

infercnv (version 0.8.2)

scale_cnv_by_spike: scale_cnv_by_spike()

Description

Scales expression data according to the expression value bounds in the SPIKE group.

Usage

scale_cnv_by_spike(infercnv_obj)

Arguments

infercnv_obj

An infercnv object populated with raw count data

Value

infercnv_obj

Details

Assumes data is centered at 1 Expression below 1 is scaled according to the left spike bound set to zero. Expression above 1 is scaled according to the right spike bound set to two.