network_genes

<p>An example dataframe with the genes contained in the network,
in the format required by the package</p>

datasets

Given a gene regulatory boolean network and a RNA-seq dataset,
this package computes protein activity normalised enrichment scores
using 'VIPER', and then produces a probabilistic network using the scores
as probabilities for fixed node activation or deactivation,
in addition to the original Boolean functions.
For more information, refer to the preprint:
Victori and Buffa (2022) <doi:10.1101/2022.09.04.506528>.

Pedro Victori

ingres

Infer Gene Probabilistic Boolean Networks from Single-Cell Data

Francesca M. Buffa

network_genes function

<p>An object of class <code>data.frame</code> with 28 rows and 2 columns.</p>

network_genes: An example dataframe with the genes contained in the network, in the format required by the package

Description

Usage

Arguments

Format