printAllNodes

Print all nodes in a network
For testing and checks purposes.

Given a gene regulatory boolean network and a RNA-seq dataset,
this package computes protein activity normalised enrichment scores
using 'VIPER', and then produces a probabilistic network using the scores
as probabilities for fixed node activation or deactivation,
in addition to the original Boolean functions.
For more information, refer to the preprint:
Victori and Buffa (2022) <doi:10.1101/2022.09.04.506528>.

Pedro Victori

ingres

Infer Gene Probabilistic Boolean Networks from Single-Cell Data

Francesca M. Buffa

printAllNodes function

<dl><dt>network</dt>
<dd>The network which nodes will be printed.</dd></dl>

Arguments

Print all nodes in a network
For testing and checks purposes. — printAllNodes

<dl>

<dt>network</dt>
<dd>The network which nodes will be printed.</dd>

</dl>

printAllNodes: Print all nodes in a network For testing and checks purposes.

Description

Usage

Value

Arguments

Examples