small_blca_wang

<p>An example small Seurat object, using dataset GSE130001 from
Wang et al. Genome Med. 2020 Dec;12(1):24.</p>

datasets

Given a gene regulatory boolean network and a RNA-seq dataset,
this package computes protein activity normalised enrichment scores
using 'VIPER', and then produces a probabilistic network using the scores
as probabilities for fixed node activation or deactivation,
in addition to the original Boolean functions.
For more information, refer to the preprint:
Victori and Buffa (2022) <doi:10.1101/2022.09.04.506528>.

Pedro Victori

ingres

Infer Gene Probabilistic Boolean Networks from Single-Cell Data

Francesca M. Buffa

small_blca_wang function

<p>An object of class <code>Seurat</code> with 16314 rows and 90 columns.</p>

small_blca_wang: An example small Seurat object, using dataset GSE130001 from Wang et al. Genome Med. 2020 Dec;12(1):24.

Description

Usage

Arguments

Format