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insideRODE (version 2.0)

insideRODE includes buildin functions with deSolve solver and C/FORTRAN interfaces to nlme, together with compiled codes.

Description

insideRODE package includes buildin functions from deSolve, compiled functions from compiler, and C/FORTRAN code interfaces to nlme. It includes nlmLSODA, nlmODE, nlmVODE,nlmLSODE for general purpose; cfLSODA,cfLSODE, cfODE, cfVODE call C/FORTRAN compiled dll functions.ver2.0 add sink()function into example it helps to directly combine c/fortran source code in R files. Finally, with new compiler package, we generated compiled functions: nlmODEcp, nlmVODEcp, nlmLSODEcp,nlmLSODAcp and cpODE, cpLSODA, cpLSODE, cpVODE. They will help to increase speed.

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Version

Install

install.packages('insideRODE')

Monthly Downloads

4

Version

2.0

License

LGPL (> 2.0)

Maintainer

YUZHUO PAN

Last Published

October 29th, 2012

Functions in insideRODE (2.0)

nlmODE

General Solver for Ordinary Differential Equations and Generate functions to be used in NLME, this version just use default function. The future version will provide buildin methods such as "lsoda", "lsode", "lsodes", "lsodar", "vode", "daspk", "euler", "rk4", "ode23", "ode45", "radau", "bdf", "bdf_d", "adams", "impAdams", "impAdams_d".
nlmLSODAcp

LSODA Solver for NLME
nlmLSODE

LSODE Solver for NLME
nlmLSODA

LSODA Solver for NLME
cfLSODE

LSODE Solver for NLME using compiled code(c or fortran)
cpVODE

Solver for Ordinary Differential Equations (VODE) and compiled functions(c/fortran) to be used in NLME
nlmVODEcp

Solver for Ordinary Differential Equations (ODE) and Generate functions to be used in NLME
insideRODE-package

insideRODE includes buildin functions with deSolve solver and C/FORTRAN interfaces to nlme, together with compiled codes.
cfODE

General Solver for Ordinary Differential Equations and compiled functions to be used in NLME, this version just use default function. The future version will provide buildin methods such as "lsoda", "lsode", "lsodes", "lsodar", "vode", "daspk", "euler", "rk4", "ode23", "ode45", "radau", "bdf", "bdf_d", "adams", "impAdams", "impAdams_d".
cpLSODE

LSODE Solver for NLME using compiled code(c or fortran)
nlmLSODEcpcp

LSODE Solver for NLME
cpLSODA

LSODA Solver for NLME using compiled code(c or fortran)
nlmODEcpcp

General Solver for Ordinary Differential Equations and Generate functions to be used in NLME, this version just use default function. The future version will provide buildin methods such as "lsoda", "lsode", "lsodes", "lsodar", "vode", "daspk", "euler", "rk4", "ode23", "ode45", "radau", "bdf", "bdf_d", "adams", "impAdams", "impAdams_d".
cfVODE

Solver for Ordinary Differential Equations (VODE) and compiled functions(c/fortran) to be used in NLME
cfLSODA

LSODA Solver for NLME using compiled code(c or fortran)
cpODE

General Solver for Ordinary Differential Equations and compiled functions to be used in NLME, this version just use default function. The future version will provide buildin methods such as "lsoda", "lsode", "lsodes", "lsodar", "vode", "daspk", "euler", "rk4", "ode23", "ode45", "radau", "bdf", "bdf_d", "adams", "impAdams", "impAdams_d".
nlmVODE

Solver for Ordinary Differential Equations (ODE) and Generate functions to be used in NLME