interacCircos (version 1.0.0)

CircosBackground: Create a BACKGROUND module to be added to a moduleList

Description

Simple background to display behind another module

Usage

CircosBackground(
  modulename,
  compareGroup = 1,
  fillColors = "#EEEEFF",
  borderColors = "#000000",
  axisShow = FALSE,
  axisColor = "#000",
  axisOpacity = 0.5,
  axisNum = 4,
  axisWidth = 0.3,
  maxRadius = 190,
  minRadius = 105,
  borderSize = 0.3,
  animationDisplay = FALSE,
  animationTime = 2000,
  animationDelay = 20,
  animationType = "bounce",
  ...
)

Arguments

modulename

The name of the new module.

compareGroup

The group number of this module in compare module

fillColors

The color of the background element, in hexadecimal RGB format.

borderColors

The color of the background borders, in hexadecimal RGB format.

axisShow

Whether show a axis or not

axisWidth, axisColor, axisOpacity, axisNum

The color, opacity value and number of line for axis

minRadius, maxRadius

Where the module should begin and end

borderSize

The thickness of the background borders.

animationDisplay

Whether display a animation or not

animationTime, animationDelay, animationType

The time, delay and display type for animation

...

Ignored

Value

The module tracks for background modules.

Examples

# NOT RUN {
Circos(CircosBackground('bg01', fillColors="#FFEEEE", borderSize = 1))

# }