iCoxph-class

The <code>iCoxph</code> class is an S4 class that represents a fitted model.
Function <code>iCoxph</code> produces objects of this class. See ``Slots''
for details.

Contains implementations of
the integrative Cox model with uncertain event times
proposed by Wang, et al. (2020) <doi:10.1214/19-AOAS1287>,
the regularized Cox cure rate model with uncertain event status
proposed by Wang, et al. (2023) <doi:10.1007/s12561-023-09374-w>,
and other survival analysis routines including
the Cox cure rate model proposed by
Kuk and Chen (1992) <doi:10.1093/biomet/79.3.531>
via an EM algorithm proposed by
Sy and Taylor (2000) <doi:10.1111/j.0006-341X.2000.00227.x>,
the regularized Cox cure rate model with elastic net penalty following
Masud et al. (2018) <doi:10.1177/0962280216677748>.

Wenjie Wang

intsurv

Integrative Survival Modeling

Kun Chen

Jun Yan

iCoxph-class function

<dl>
<dt><code>call</code></dt>
<dd>Function call.</dd></dl>
<dt><code>formula</code></dt>
<dd>Model formula.</dd>
<dt><code>nObs</code></dt>
<dd>A positive integer.</dd>
<dt><code>data</code></dt>
<dd>A data frame.</dd>
<dt><code>estimates</code></dt>
<dd>A list.</dd>
<dt><code>start</code></dt>
<dd>A list.</dd>
<dt><code>control</code></dt>
<dd>A list.</dd>
<dt><code>na.action</code></dt>
<dd>A length-one character vector.</dd>
<dt><code>xlevels</code></dt>
<dd>A list.</dd>
<dt><code>contrasts</code></dt>
<dd>A list.</dd>
<dt><code>convergeCode</code></dt>
<dd>A non-negative integer.</dd>
<dt><code>logL</code></dt>
<dd>A numeric value.</dd>

Slots

An S4 Class to Represent a Fitted Integrative Cox Model — iCoxph-class

<dl>
<dt><code>call</code></dt>
<dd>Function call.</dd>


<dt><code>formula</code></dt>
<dd>Model formula.</dd>


<dt><code>nObs</code></dt>
<dd>A positive integer.</dd>


<dt><code>data</code></dt>
<dd>A data frame.</dd>


<dt><code>estimates</code></dt>
<dd>A list.</dd>


<dt><code>start</code></dt>
<dd>A list.</dd>


<dt><code>control</code></dt>
<dd>A list.</dd>


<dt><code>na.action</code></dt>
<dd>A length-one character vector.</dd>


<dt><code>xlevels</code></dt>
<dd>A list.</dd>


<dt><code>contrasts</code></dt>
<dd>A list.</dd>


<dt><code>convergeCode</code></dt>
<dd>A non-negative integer.</dd>


<dt><code>logL</code></dt>
<dd>A numeric value.</dd>


</dl>

iCoxph-class: An S4 Class to Represent a Fitted Integrative Cox Model

Description

Arguments

Slots

See Also