smeltz2023.uc.L4

Smeltz2023.uc.L4

Bayesian estimate of plasma protein binding measured by
ultracentrifugation (UC) for per- and poly-fluorinated alkyl substance
(PFAS) samples from experiments led by Dr.s Marci Smeltz and Barbara Wetmore.

data

A collection of datasets containing a variety of in vitro toxicokinetic
measurements including -- but not limited to -- chemical fraction unbound
in the presence of plasma (f_up), intrinsic hepatic clearance (Clint,
uL/min/million hepatocytes), and membrane permeability for
oral absorption (Caco2). The datasets provided by the package were
processed and analyzed with the companion 'invitroTKstats' package.

Caroline Ring

invitroTKdata

In Vitro Toxicokinetic Data Processed with the 'invitroTKstats'
Pipeline

Sarah E. Davidson-Fritz

John Wambaugh

Lindsay Knupp

Barbara A. Wetmore

Anna Kreutz

Marci Smeltz

David Crizer

U.S. Federal Government 

smeltz2023.uc.L4 function

A level-4 data.frame with 69 rows and 7 variables:<dl>
<dt><code>Compound.Name</code></dt>
<dd>Compound name</dd><dt><code>DTXSID</code></dt>
<dd>DSSTox Substance Identifier (CompTox Chemicals Dashboard)</dd><dt><code>Lab.Compound.Name</code></dt>
<dd>Compound as described in the laboratory</dd><dt><code>Fup.Med</code></dt>
<dd>Posterior median fraction unbound in plasma</dd><dt><code>Fup.Low</code></dt>
<dd>Posterior 2.5th quantile of fraction unbound in plasma (lower credible interval bound)</dd><dt><code>Fup.High</code></dt>
<dd>Posterior 97.5th quantile of fraction unbound in plasma (upper credible interval bound)</dd><dt><code>Fup.point</code></dt>
<dd>Point estimate of fraction unbound in plasma</dd>
</dl>

Format

smeltz2023plasma;textualinvitroTKdata Ultracentrifugation Level-4 Data Set — smeltz2023.uc.L4

A level-4 data.frame with 69 rows and 7 variables:<dl>
<dt><code>Compound.Name</code></dt>
<dd>Compound name</dd>

<dt><code>DTXSID</code></dt>
<dd>DSSTox Substance Identifier (CompTox Chemicals Dashboard)</dd>

<dt><code>Lab.Compound.Name</code></dt>
<dd>Compound as described in the laboratory</dd>

<dt><code>Fup.Med</code></dt>
<dd>Posterior median fraction unbound in plasma</dd>

<dt><code>Fup.Low</code></dt>
<dd>Posterior 2.5th quantile of fraction unbound in plasma (lower credible interval bound)</dd>

<dt><code>Fup.High</code></dt>
<dd>Posterior 97.5th quantile of fraction unbound in plasma (upper credible interval bound)</dd>

<dt><code>Fup.point</code></dt>
<dd>Point estimate of fraction unbound in plasma</dd>


</dl>

smeltz2023plasma;textualinvitroTKdata Ultracentrifugation Level-4 Data Set

smeltz2023.uc.L4: smeltz2023plasma;textualinvitroTKdata Ultracentrifugation Level-4 Data Set

Description

Usage

Arguments

Format

References