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iontree (version 1.18.0)

iontree-package: MSn-iontree: Ion tree management and analysis

Description

management and analysis of ion fragmentation data

Arguments

Details

Package:
iontree
Type:
Package
LazyLoad:
yes
This package provides functions to retrieve MSn fragmentation data, build MS2/MS3 ion trees from ion-trap low resoultion mass spectrometry and to create a relational database (SQLite-based) for routine management of ion tree data. Other functions include metrics for MS2 spectral simialrity measurement, iontree plotting and DB operations.

References

JRAP -- a Java library was used for parsing mzXML and mzML http://sashimi.svn.sourceforge.net/viewvc/sashimi/trunk/jrap/stax/software/

See Also