ratiosReshapeWide

Output of proteinRatios or peptideRatios.

quant.tbl

Only return ratios where class1 is vs.class

vs.class

Separator for column names in the reshape.

cmbn

If vs.class is set and short.names=TRUE, then the comparision 
    name will be i.e. 'class2' instead of 'class2/class1'.

short.names


  Reshape output of proteinRatios into wide format


isobar provides methods for preprocessing, normalization, and
report generation for the analysis of quantitative mass spectrometry
proteomics data labeled with isobaric tags, such as iTRAQ and TMT.
Features modules for integrating and validating PTM-centric datasets
(isobar-PTM). More information on http://www.ms-isobar.org.

Florian P Breitwieser

isobar

Analysis and quantitation of isobarically tagged MSMS proteomics data

ratiosReshapeWide function

Reshape output of proteinRatios into wide format

ratiosReshapeWide: Reshape output of proteinRatios into wide format

Description

Usage

Arguments