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Codify Specimens' genotypes instances as numeric codes [-1/0/1] or as character vector that keeps the phase information.
genotype(pop, phase = FALSE)A numeric or character matrix with the codified Specimens' genotypes.
a list with instances of the R6 class Specimen.
logical should the codes keep the phase.
data(ToyMap)
spc <- set_specie(ToyMap)
Aa <- founder(spc, "Aa")
aA <- spc$founder("aA")
Both <- list(Aa = Aa, aA = aA)
## different ways
genotype(Both) # as numeric
genotype(Both, phase = TRUE) # as character
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